Prof. RNDr. Jaroslav Koča, DrSc.
Field of study: Biomolecular Chemistry
supervisor of doctoral students
- Jan Adam (graduate 2010, topic: Structure-functional analysis and molecular modeling of interactions of bacterial lectins and saccharides)
- Jan Alán (topic: Free energy calculations on lectin/carbohydrate complexes)
- Iveta Bártová (graduate 2006, topic: Molecular dynamics on cyclin-dependent kinases)
- Michal Boháč (graduate 2005, topic: Molecular Modelling of Enzymatic Dehalogenation Reactions)
- Radka Chaloupková (graduate 2008, topic: Structure-function relationships of haloalkane dehalogenase enzymes)
- Crina-Maria Ionescu (topic: Fast methods of charge calculations)
- Deepti Jaiswal
- Nikola Kostlánová (graduate 2006, topic: Structure-function studies on selected carbohydraterelated proteins)
- Alexej Kulaš
- Radek Matuška (topic: Theoretical study on saccharide non-bonded interactions)
- Navnit Kumar Mishra (graduate 2009, topic: : Structure-function studies on lectins from pathogens and their interactions with human biologically relevant oligosaccharides)
- Sushil Kumar Mishra
- Zuzana Novotná Jiroušková
- Josef Pasulka
- Martina Pokorná (graduate 2006, topic: Lectins participating in specific host pathogen recognition)
- Martin Prokop (graduate 2004, topic: TRITON - software for rational design of proteins)
- Filip Rázga (graduate 2007, topic: Structure and Dynamics of rRNA: a computational study)
- Zora Střelcová (topic: Dvelopment and application of methods for enzymatic reaction reaction mechanisms studies)
- Radka Svobodová Vařeková (graduate 2007, topic: Charge calculation and Study of Electrostatic Interactions in Molecular Mechanics)
- Lenka Šnajdrová (graduate 2006, topic: Molecular modeling of lectins and glycosyltransferases)
- Jakub Štěpán (topic: Dvelopment and application of methods for enzymatic reaction reaction mechanisms studies)
- Stanislav Tomingas (topic: Reactivation of Acetylcholinesterase)
- Tomáš Trnka (topic: Theoretical study on saccharide non-bonded interactions)
- Jiří Wiesner (graduate 2011, topic: Investigation of Acetylcholinesterase by the Means of Computational Chemistry)
Field of study: Biophysics
supervisor of doctoral students
- Kamila Réblová (graduate 2005, topic: Computational study of unusual structural forms of nucleic acids)
- Jitka Vévodová (graduate 2002, topic: Solving Structures of Biomacromolecules by X-ray Diffraction Methods)
Field of study: Computer Systems and Technologies
supervisor of doctoral students
Field of study: Environmental Chemistry
supervisor of doctoral students
- Martina Pavlová (graduate 2009, topic: Screening and in vitro construction of environmental biocatalysts)
Field of study: Organic Chemistry
supervisor of doctoral students
- Michal Čajan (graduate 2002, topic: Some Anionic Complexes and Their Building Blocks. A Computational Study)
- Eva Fadrná (graduate 1999)
- Jan Grůza (graduate 1999)
- Zdeněk Kříž (graduate 1999)
- Petr Kulhánek (graduate 2006, topic: Selected Entity Transfers in Biomolecular Systems Studied by Computional Methods)
- Michal Kutý (graduate 1999)
- Pavla Sitková (graduate 2001)
Field of study: Physical Chemistry
supervisor of doctoral students
- Jan Kmuníček (graduate 2003, topic: RATIONAL RE-DESIGN OF HALOALKANE DEHALOGENASES GUIDED BY COMPARATIVE BINDING ENERGY ANALYSIS)
- Richard Štefl (graduate 2001, topic: Structure and Dynamics of Selected Nucleic Acid Motifs by Molecular Dynamics)
