prof. Mgr. Richard Štefl, Ph.D.

2005

• A novel RNA pentaloop fold involved in targeting ADAR2

  ŠTEFL Richard ALLAIN Frederic

  Article in Periodical

  RNA, year: 2005, volume: 11, edition: 5

• Resonance assignments of the double-stranded RNA-binding of adenosine deaminase acting on RNA 2 (ADAR2)

  ŠTEFL Richard SKŘÍŠOVSKÁ Lenka XU Ming EMESON Ron ALLAIN Frederic

  Article in Periodical

  JOURNAL OF BIOMOLECULAR NMR, year: 2005, volume: 31, edition: 1

• RNA sequence- and shape-dependent recognition by proteins in the ribonucleoprotein particle

  ŠTEFL Richard SKŘÍŠOVSKÁ Lenka ALLAIN Frederic

  Article in Periodical

  EMBO REPORTS, year: 2005, volume: 6, edition: 1

2004

• DNA A-tract bending in three dimensions: Solving the dA4T4 vs. dT4A4 conundrum

  ŠTEFL Richard WU Haihong RAVINDRANATHAN Sapna SKLENÁŘ Vladimír FEIGON Juli

  Article in Periodical

  Proceedings of the National Academy of Sciences of the U.S.A., year: 2004, volume: 101, edition: 5

• Molecular dynamics simulations of guanine quadruplex loops:Advances and force field limitations

  FADRNÁ Eva ŠPAČKOVÁ Naděžda ŠTEFL Richard KOČA Jaroslav CHEATHAM Thomas E. ŠPONER Jiří

  Article in Periodical

  Biophysical Journal, year: 2004, volume: 87, edition: 1

2003

• Formation Pathways of a Guanine-Quadruplex DNA Revealed by Molecular Dynamics and Thermodynamics Analysis of the Substates

  ŠTEFL Richard CHEATHAM Thomas E. ŠPAČKOVÁ Naděžda FADRNÁ Eva BERGER Imre KOČA Jaroslav ŠPONER Jiří

  Article in Periodical

  Biophysical Journal, year: 2003, volume: 85, edition: 3

• Molecular Dynamics of Guanine Quadruplex Molecules

  ŠPAČKOVÁ Naděžda ŠTEFL Richard BERGER Imre FADRNÁ Eva KOČA Jaroslav CHEATHAM III T.E. ŠPONER Jiří

  Article in Proceedings

  Book of Abstracts, year: 2003

• Non-Watson-Crick Basepairing and Hydration in RNA Motifs:

  RÉBLOVÁ Kamila SPACKOVÁ Nadezda STEFL Richard CSASZAR Kristina KOCA Jaroslav LEONTIS Neocles SPONER Jiri

  Article in Periodical

  Biophysical Journal, year: 2003, volume: 84, edition: 6

2002

• Determination of the glycosidic torsion angels in uniformly C-13 labeled nucleic acids from vicinal coupling constants 3J(C2/4-H1') and 3J(C6/8-H1')

  TRANTÍREK Lukáš ŠTEFL Richard MASSE James FEIGON Juli SKLENÁŘ Vladimír

  Article in Periodical

  Journal of Biomolecular NMR, year: 2002, volume: 23, edition: 1

• Molecular dynamics of the 5S rRNA loop E

  RÉBLOVÁ Kamila ŠPAČKOVÁ Naděžda ŠTEFL Richard CSASZAR Kristina KOČA Jaroslav LEONTIS Neocles ŠPONER Jiří

  Article in Proceedings

  Chemometrics, year: 2002