doc. RNDr. Eduard Kejnovský, CSc.

2024

• Insights into the Evolution of Centromere from Holocentric Luzula sylvatica (Juncaceae)

  KRÁTKÁ Marie MATA-SUCRE Yennifer JEDLIČKA Pavel KEJNOVSKÝ Eduard MARQUES André

  Conference abstract

  Year: 2024, type: Conference abstract

2023

• Evolutionary Dynamics of LTR Retrotransposons in Holocentric Plants from Juncaceae Family

  KRÁTKÁ Marie JEDLIČKA Pavel KUBÁT Zdeněk KEJNOVSKÝ Eduard

  Conference abstract

  Year: 2023, type: Conference abstract

• TE-greedy-nester: a tool for reconstruction of transposable elements in plant genomes

  JEDLIČKA Pavel VANÁT Ivan LEXA Matej KRÁTKÁ Marie KEJNOVSKÝ Eduard

  Article in Proceedings

  Workshop on Bioinformatics and Computational Biology (WBCB 2023), year: 2023

2022

• HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization

  LEXA Matej ČECHOVÁ Monika NGUYEN Son Hoang JEDLIČKA Pavel TOKAN Viktor KUBÁT Zdeněk HOBZA Roman KEJNOVSKÝ Eduard

  Article in Periodical

  BIOINFORMATICS, year: 2022, volume: 38, edition: 16, DOI

• LTR retrotransposons in holocentric plants from the Cyperaceae and Juncaceae families

  KRÁTKÁ Marie JEDLIČKA Pavel KUBÁT Zdeněk TOKAN Viktor ŠMERDA Jakub BUREŠ Petr KEJNOVSKÝ Eduard

  Conference abstract

  Year: 2022, type: Conference abstract

2020

• TE-greedy-nester: structure-based detection of LTR retrotransposons and their nesting

  LEXA Matej JEDLICKA Pavel VANÁT Ivan ČERVEŇANSKÝ Michal KEJNOVSKÝ Eduard

  Article in Periodical

  Bioinformatics, year: 2020, volume: 36, edition: 20, DOI

• What Can Long Terminal Repeats Tell Us About the Age of LTR Retrotransposons, Gene Conversion and Ectopic Recombination?

  JEDLICKA Pavel LEXA Matej KEJNOVSKÝ Eduard

  Article in Periodical

  Frontiers in Plant Science, year: 2020, volume: 11, edition: 644, DOI

2019

• Nested plant LTR retrotransposons target specific regions of other elements, while all LTR retrotransposons often target palindromes and nucleosome-occupied regions: in silico study

  JEDLIČKA Pavel LEXA Matej VANÁT Ivan KEJNOVSKÝ Eduard HOBZA Roman

  Article in Periodical

  Mobile DNA, year: 2019, volume: 10, edition: 1, DOI

2018

• Quadruplex DNA in long terminal repeats in maize LTR retrotransposons inhibits the expression of a reporter gene in yeast

  TOKAN Viktor PUTEROVÁ Janka LEXA Matej KEJNOVSKÝ Eduard

  Article in Periodical

  BMC Genomics, year: 2018, volume: 19, edition: 06 03 2018, DOI

• TE-nester: a recursive software tool for structure-based discovery of nested transposable elements

  LEXA Matej LAPÁR Radovan JEDLIČKA Pavel VANÁT Ivan ČERVEŇANSKÝ Michal KEJNOVSKÝ Eduard

  Article in Proceedings

  Proceedings 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), year: 2018