doc. RNDr. Petr Matula, Ph.D.

2015

• Automated Cell Segmentation in Phase-Contrast Images based on Classification and Region Growing

  STOKLASA Roman BÁLEK Lukáš KREJČÍ Pavel MATULA Petr

  Article in Proceedings

  Proceedings of 2015 IEEE International Symposium on Biomedical Imaging, 2015., year: 2015

• Cell tracking accuracy measurement based on comparison of acyclic oriented graphs

  MATULA Pavel MAŠKA Martin SOROKIN Dmitry MATULA Petr ORTIZ-DE-SOLÓRZANO Carlos KOZUBEK Michal

  Article in Periodical

  PLoS ONE, year: 2015, volume: 10, edition: 12, DOI

• Fibroblast growth factor and canonical WNT/beta-catenin signaling cooperate in suppression of chondrocyte differentiation in experimental models of FGFR signaling in cartilage

  BUCHTOVÁ marcela ORALOVÁ Veronika AKLIAN Anie MAŠEK Jan VESELA Iva OUYANG Zhufeng OBADALOVÁ Tereza KONEČNÁ Žaneta SPOUSTOVÁ Tereza POSPÍŠILOVÁ Tereza MATULA Petr VAŘECHA Miroslav BÁLEK Lukáš GUDERNOVÁ Iva JELÍNKOVÁ Iva DURAN Ivan ČERVENKOVÁ Iveta MURAKAMI Shunichi KOZUBÍK Alois DVOŘÁK Petr BRYJA Vítězslav KREJČÍ Pavel

  Article in Periodical

  Biochimica et Biophysica Acta - Molecular Basis of Disease, year: 2015, volume: 1852, edition: 5, DOI

• GPU Implementation of Linear Morphological Openings with Arbitrary Angle

  KARAS Pavel MORARD Vincent BARTOVSKÝ Jan GRANDPIERRE Thierry DOKLÁDALOVÁ Eva MATULA Petr DOKLÁDAL Petr

  Article in Periodical

  Journal of Real-Time Image Processing, year: 2015, volume: 10, edition: 1, DOI

• Performance and Sensitivity Evaluation of 3-D Spot Detection Methods in Confocal Microscopy

  ŠTĚPKA Karel MATULA Pavel MATULA Petr WOERZ Stefan ROHR Karl KOZUBEK Michal

  Article in Periodical

  Cytometry Part A, year: 2015, volume: 87A, edition: 8, DOI

• The SUMOylation Pathway Restricts Gene Transduction by Adeno-Associated Viruses

  HÖLSCHER Christina SONNTAG Florian HENRICH Katharina CHEN Qingxin BENEKE Jürgen MATULA Petr ROHR Karl KADERALI Lars BEIL Nina ERFLE Holger KLEINSCHMIDT Jürgen A MARTIN Müller

  Article in Periodical

  PLoS Pathogens, year: 2015, volume: 11, edition: 12, DOI

2014

• A Benchmark for Comparison of Cell Tracking Algorithms

  MAŠKA Martin ULMAN Vladimír SVOBODA David MATULA Pavel MATULA Petr EDERRA Cristina URBIOLA Ainhoa ESPANA Tomás VENKATESAN Subramanian BALAK Deepak M W KARAS Pavel BOLCKOVÁ Tereza ŠTREITOVÁ Markéta CARTHEL Craig CORALUPPI Stefano HARDER Nathalie ROHR Karl MAGNUSSON Klas E G JALDÉN Joakim BLAU Helen M DZYUBACHYK Oleh KŘÍŽEK Pavel HAGEN Guy M PASTOR-ESCUREDO David JIMENEZ-CARRETERO Daniel LEDESMA-CARBAYO Maria J MUNOZ-BARRUTIA Arrate MEIJERING Erik KOZUBEK Michal ORTIZ-DE-SOLORZANO Carlos

  Article in Periodical

  Bioinformatics, year: 2014, volume: 30, edition: 11, DOI

2013

• Use of Human Pluripotent Stem Cells to Derive and Quantify Endothelial Cell-Smooth Muscle Cell Interactions In Vitro

  MOTL Jason A. MATULA Petr LEPLEY Mike A. LI Li KAUFMAN Dan S.

  Appeared in Conference without Proceedings

  Year: 2013, type: Appeared in Conference without Proceedings

2012

• Live cell assays to identify regulators of ER to Golgi trafficking

  LISAUSKAS Tautvydas MATULA Petr CLAAS Christoph REUSING Susanne WIEMANN Stefan ERFLE Holger LEHMANN Lars FISCHER Peter EILS Roland ROHR Karl STORRIE Brian STARKUVIENE Vytaute

  Article in Periodical

  Traffic, year: 2012, volume: 13, edition: 3, DOI

• miR-17-5p Regulates Endocytic Trafficking through Targeting TBC1D2/Armus

  SERVA Andrius KNAPP Bettina TSAI Yueh-Tso CLASS Christoph LISAUSKAS Tautvydas MATULA Petr HARDER Nathalie KADERALI Lars ROHR Karl ERFLE Holger EILS Roland BRAGA Vania STARKUVIENE Vytaute

  Article in Periodical

  PLoS One, year: 2012, volume: 7, edition: 12, DOI