doc. Ing. Matej Lexa, Ph.D.

Associate professor, Department of Machine Learning and Data Processing

office: C202
Botanická 554/68a
602 00 Brno

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phone:	+420 549 49 5765
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Basic information

Type

Total number of publications: 114

2024

A perspective on genetic and polygenic risk scores - advances and limitations and overview of associated tools

SCHWARZEROVÁ Jana HURTA Martin BARTOŇ Vojtěch LEXA Matej WALTHER Dirk PROVAZNÍK Valentine WECKWERTH Wolfram

Article in Periodical

Briefings in Bioinformatics, year: 2024, volume: 25, edition: 3, DOI
Detection and classification of long terminal repeat sequences in plant LTR-retrotransposons and their analysis using explainable machine learning

HORVÁTH Jakub JEDLIČKA Pavel KRÁTKÁ Marie KUBÁT Zdeněk KEJNOVSKÝ Eduard LEXA Matej

Article in Periodical

BIODATA MINING, year: 2024, volume: 17, edition: 1, DOI
High-throughput spike detection in greenhouse cultivated grain crops with attention mechanisms based deep learning models

ULLAH Sajid PANZAROVÁ Klára TRTÍLEK Martin LEXA Matej MÁČALA Vojtěch ALTMANN Thomas NEUMANN Kerstin HEJÁTKO Jan PERNISOVÁ Markéta GLADILIN Evgeny

Article in Periodical

Plant Phenomics, year: 2024, volume: 2024, edition: March, DOI

2023

Alternatives to classical HiC data analysis

LEXA Matej HEGYI Hedvig

Article in Proceedings

Workshop on Bioinformatics and Computational Biology (WBCB 2023), year: 2023
Analysis and classification of long terminal repeat sequences from plant LTR-retrotransposons

HORVÁTH Jakub LEXA Matej

Article in Proceedings

Workshop on Bioinformatics and Computational Biology (WBCB 2023), year: 2023
ITAT’23: Information technologies – Applications and Theory, September 22–26, 2023, Tatranské Matliare, Slovakia

BREJOVÁ Bronislava CIENCIALOVÁ Lucie HOLEŇA Martin JAJCAY Róbert JAJCAYOVÁ Tatiana LEXA Matej MRÁZ František PARDUBSKÁ Dana PLÁTEK Martin

Workshop

Year: 2023, type: Workshop
TE-greedy-nester: a tool for reconstruction of transposable elements in plant genomes

JEDLIČKA Pavel VANÁT Ivan LEXA Matej KRÁTKÁ Marie KEJNOVSKÝ Eduard

Article in Proceedings

Workshop on Bioinformatics and Computational Biology (WBCB 2023), year: 2023
Workshop on Bioinformatics and Computational Biology WBCB 2023

BREJOVÁ Bronislava LEXA Matej

Workshop

Year: 2023, type: Workshop

2022

HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization

LEXA Matej ČECHOVÁ Monika NGUYEN Son Hoang JEDLIČKA Pavel TOKAN Viktor KUBÁT Zdeněk HOBZA Roman KEJNOVSKÝ Eduard

Article in Periodical

BIOINFORMATICS, year: 2022, volume: 38, edition: 16, DOI

2021

Escherichia coli Strains Producing Selected Bacteriocins Inhibit Porcine Enterotoxigenic Escherichia coli (ETEC) under both In Vitro and In Vivo Conditions

HRALA Matěj BOSÁK Juraj MICENKOVÁ Lenka KŘENOVÁ Jitka LEXA Matej PIRKOVÁ Viktória TOMASTIKOVA Zuzana KOLÁČKOVÁ Ivana ŠMAJS David

Article in Periodical

Applied and Environmental Microbiology, year: 2021, volume: 87, edition: 14, DOI