doc. RNDr. Petr Holub, Ph.D.
Department head, BioMedAI Centre
Correspondence Address:
Šumavská 416/15, 602 00 Brno
E‑mail: |
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Total number of publications: 194
2023
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xOpat: eXplainable Open Pathology Analysis Tool
HORÁK Jiří FURMANOVÁ Katarína KOZLÍKOVÁ Barbora BRÁZDIL Tomáš HOLUB Petr KAČENGA Martin GALLO Matej NENUTIL Rudolf BYŠKA Jan RUSŇÁK Vít
Article in Periodical
COMPUTER GRAPHICS FORUM, year: 2023, volume: 42, edition: 3, DOI
2022
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Automated annotations of epithelial cells and stroma in hematoxylin–eosin-stained whole-slide images using cytokeratin re-staining
BRÁZDIL Tomáš GALLO Matej NENUTIL Rudolf KUBANDA Andrej TOUFAR Martin HOLUB Petr
Article in Periodical
The Journal of Pathology: Clinical Research, year: 2022, volume: 8, edition: 2, DOI
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Lightweight Distributed Provenance Model for Complex Real–world Environments
WITTNER Rudolf MASCIA Cecilia GALLO Matej FREXIA Francesca MÜLLER Heimo PLASS Markus GEIGER Jörg HOLUB Petr
Article in Periodical
Scientific Data, year: 2022, volume: 2022, edition: 9, DOI
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Position paper on management of personal data in environment and health research in Europe
GOVARTS Eva GILLES Liese BOPP Stephanie HOLUB Petr MATALONGA Leslie VERMEULEN Roel VRIJHEID Martine BELTRAN Sergi HARTLEV Mette JONES Sarah MARTIN Laura Rodriguez STANDAERT Arnout SWERTZ Morris A THEUNIS Jan TRIER Xenia VOGEL Nina VAN ESPEN Koert REMY Sylvie SCHOETERS Greet
Article in Periodical
Environment International, year: 2022, volume: 165, DOI
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The Common Provenance Model: Capturing Distributed Provenance in Life Sciences Processes
FREXIA Francesca MASCIA Cecilia WITTNER Rudolf PLASS Markus MÜLLER Heimo GEIGER Jörg HOLUB Petr
Conference abstract
Year: 2022, type: Conference abstract
2021
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BBMRI-ERIC Negotiator: Implementing Efficient Access to Biobanks
REIHS Robert PROYNOVA Rumyana MAQSOOD Saher ATAIAN Maxmilian LABLANS Martin QUINLAN Philip R. LAWRENCE Emma BOWMAN Erinna VAN ENCKEVORT Esther BUČÍK Dominik František MÜLLER Heimo HOLUB Petr
Article in Periodical
Biopreservation and Biobanking, year: 2021, DOI
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Enabling Trustworthy and Traceable Research by Non-Repudiable Opaque Provenance in a Distributed Environment
WITTNER Rudolf GEIGER Jörg MASCIA Cecilia FREXIA Francesca MULLER Heimo HOLUB Petr
Conference abstract
Year: 2021, type: Conference abstract
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GA4GH: International policies and standards for data sharing across genomic research and healthcare
REHM Heidi PAGE Angela SMITH Lindsay ADAMS Jeremy ALTEROVITZ Gil BABB Lawrence BARKLEY Maxmillian BAUDIS Michael BEAUVAIS Michael BECK Tim BECKMANN Jacques BELTRAN Sergi BERNICK David BERNIER Alexander BONFIELD James BOUGHTWOOD Tiffany BOURQUE Guillaume BOWERS Sarion BROOKES Anthony BRUDNO Michael BRUSH Matthew BUJOLD David BURDETT Tony BUSKE Orion CABILI Moran CAMERON Daniel CARROLL Robert CASAS-SILVA Esmeralda CHAKRAVARTY Debyani CHAUDHARI Bimal CHEN Shu Hui CHERRY Michael CHUNG Justina CLINE Melissa CLISSOLD Hayley COOK-DEEGAN Robert COURTOT Mélanie CUNNINGHAM Fiona CUPAK Miro DAVIES Robert DENISKO Danielle DOERR Megan DOLMAN Lena DOVE Edward DURSI Jonathan DYKE Stephanie EDDY James EILBECK Karen ELLROTT Kyle FAIRLEY Susan FAKHRO Khalid FIRTH Helen FITZSIMONS Michael FIUME Marc FLICEK Paul FORE Ian FREEBERG Mallory FREIMUTH Robert FROMONT Lauren FUERTH Jonathan GAFF Clara GAN Weiniu GHANAIM Elena GLAZER David GREEN Robert GRIFFITH Malachi GRIFFITH Obi GROSSMAN Robert GROZA Tudor AUVIL Jaime Guidry GUIGÓ Roderic GUPTA Dipayan HAENDEL Melissa HAMOSH Ada HANSEN David HART Reece HARTLEY Dean Mitchell HAUSSLER David HENDRICKS-STURRUP Rachele HO Calvin HOBB Ashley HOFFMAN Michael HOFMANN Oliver HOLUB Petr HSU Jacob Shujui HUBAUX Jean-Pierre HUNT Sarah HUSAMI Ammar JACOBSEN Julius JAMUAR Saumya JANES Elizabeth JEANSON Francis JENÉ Aina JOHNS Amber JOLY Yann JONES Steven KANITZ Alexander KATO Kazuto KEANE Thomas KEKESI-LAFRANCE Kristina KELLEHER Jerome KERRY Giselle KHOR Seik-Soon KNOPPERS Bartha KONOPKO Melissa KOSAKI Kenjiro KUBA Martin LAWSON Jonathan LEINONEN Rasko LI Stephanie LIN Michael LINDEN Mikael LIU Xianglin LIYANAGE Isuru Udara LOPEZ Javier LUCASSEN Anneke LUKOWSKI Michael MANN Alice MARSHALL John MATTIONI Michele METKE-JIMENEZ Alejandro MIDDLETON Anna MILNE Richard MOLNÁR-GÁBOR Fruzsina MULDER Nicola MUNOZ-TORRES Monica NAG Rishi NAKAGAWA Hidewaki NASIR Jamal NAVARRO Arcadi NELSON Tristan NIEWIELSKA Ania NISSELLE Amy NIU Jeffrey NYRÖNEN Tommi BRIAN O Connor OESTERLE Sabine OGISHIMA Soichi WANG Vivian Ota PAGLIONE Laura PALUMBO Emilio PARKINSON Helen PHILIPPAKIS Anthony PIZARRO Angel PRLIC Andreas RAMBLA Jordi RENDON Augusto RIDER Renee ROBINSON Peter RODARMER Kurt RODRIGUEZ Laura Lyman RUBIN Alan RUEDA Manuel RUSHTON Gregory RYAN Rosalyn SAUNDERS Gary SCHUILENBURG Helen SCHWEDE Torsten SCOLLEN Serena SENF Alexander SHEFFIELD Nathan SKANTHARAJAH Neerjah SMITH Albert SOFIA Heidi SPALDING Dylan SPURDLE Amanda STARK Zornitza STEIN Lincoln SUEMATSU Makoto TAN Patrick TEDDS Jonathan THOMSON Alastair THOROGOOD Adrian TICKLE Timothy TOKUNAGA Katsushi TÖRNROOS Juha TORRENTS David UPCHURCH Sean VALENCIA Alfonso VALLS GUIMERA Roman VAMATHEVAN Jessica VARMA Susheel VEARS Danya VINER Coby VOISIN Craig WAGNER Alex WALLACE Susan WALSH Brian WILLIAMS Marc WINKLER Eva WOLD Barbara WOOD Grant WOOLLEY Patrick YAMASAKI Chisato YATES Andrew YUNG Christina ZASS Lyndon ZAYTSEVA Ksenia ZHANG Junjun GOODHAND Peter NORTH Kathryn BIRNEY Ewan
Article in Periodical
Cell Genomics, year: 2021, volume: 2021, edition: 1, DOI
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GA4GH: International policies and standards for data sharing across genomic research and healthcare
REHM Heidi L PAGE Angela J H SMITH Lindsay ADAMS Jeremy B ALTEROVITZ Gil BABB Lawrence J BARKLEY Maxmillian P BAUDIS Michael BEAUVAIS Michael J S BECK Tim BECKMANN Jacques S BELTRAN Sergi BERNICK David BERNIER Alexander BONFIELD James K BOUGHTWOOD Tiffany F BOURQUE Guillaume BOWERS Sarion R BROOKES Anthony J BRUDNO Michael BRUSH Matthew H BUJOLD David BURDETT Tony BUSKE Orion J CABILI Moran N CAMERON Daniel L CARROLL Robert J CASAS-SILVA Esmeralda CHAKRAVARTY Debyani CHAUDHARI Bimal P CHEN Shu Hui CHERRY J Michael CHUNG Justina CLINE Melissa CLISSOLD Hayley L COOK-DEEGAN Robert M COURTOT Melanie CUNNINGHAM Fiona CUPAK Miro DAVIES Robert M DENISKO Danielle DOERR Megan J DOLMAN Lena I DOVE Edward S DURSI L Jonathan DYKE Stephanie O M EDDY James A EILBECK Karen ELLROTT Kyle P FAIRLEY Susan FAKHRO Khalid A FIRTH Helen V FITZSIMONS Michael S FIUME Marc FLICEK Paul FORE Ian M FREEBERG Mallory A FREIMUTH Robert R FROMONT Lauren A FUERTH Jonathan GAFF Clara L GAN Weiniu GHANAIM Elena M GLAZER David GREEN Robert C GRIFFITH Malachi GRIFFITH Obi L GROSSMAN Robert L GROZA Tudor AUVIL Jaime M Guidry GUIGO Roderic GUPTA Dipayan HAENDEL Melissa A HAMOSH Ada HANSEN David P HART Reece K HARTLEY Dean Mitchell HAUSSLER David HENDRICKS-STURRUP Rachele M HO Calvin W L HOBB Ashley E HOFFMAN Michael M HOFMANN Oliver M HOLUB Petr HSU Jacob Shujui HUBAUX Jean-Pierre HUNT Sarah E HUSAMI Ammar JACOBSEN Julius O JAMUAR Saumya S JANES Elizabeth L JEANSON Francis JENE Aina JOHNS Amber L JOLY Yann JONES Steven J M KANITZ Alexander KATO Kazuto KEANE Thomas M KEKESI-LAFRANCE Kristina KELLEHER Jerome KERRY Giselle KHOR Seik-Soon KNOPPERS Bartha M KONOPKO Melissa A KOSAKI Kenjiro KUBA Martin LAWSON Jonathan LEINONEN Rasko LI Stephanie LIN Michael F LINDEN Mikael LIU Xianglin LIYANAGE Isuru Udara LOPEZ Javier LUCASSEN Anneke M LUKOWSKI Michael MANN Alice L MARSHALL John MATTIONI Michele METKE-JIMENEZ Alejandro MIDDLETON Anna MILNE Richard J MOLNAR-GABOR Fruzsina MULDER Nicola MUNOZ-TORRES Monica C NAG Rishi NAKAGAWA Hidewaki NASIR Jamal NAVARRO Arcadi NELSON Tristan H NIEWIELSKA Ania NISSELLE Amy NIU Jeffrey NYRONEN Tommi H CONNOR Brian D OESTERLE Sabine OGISHIMA Soichi WANG Vivian Ota PAGLIONE Laura A D PALUMBO Emilio PARKINSON Helen E PHILIPPAKIS Anthony A PIZARRO Angel D PRLIC Andreas RAMBLA Jordi RENDON Augusto RIDER Renee A ROBINSON Peter N RODARMER Kurt W RODRIGUEZ Laura Lyman RUBIN Alan F RUEDA Manuel RUSHTON Gregory A RYAN Rosalyn S SAUNDERS Gary I SCHUILENBURG Helen SCHWEDE Torsten SCOLLEN Serena SENF Alexander SHEFFIELD Nathan C SKANTHARAJAH Neerjah SMITH Albert V SOFIA Heidi J SPALDING Dylan SPURDLE Amanda B STARK Zornitza STEIN Lincoln D SUEMATSU Makoto TAN Patrick TEDDS Jonathan A THOMSON Alastair A THOROGOOD Adrian TICKLE Timothy L TOKUNAGA Katsushi TOMROOS Juha TORRENTS David UPCHURCH Sean VALENCIA Alfonso GUIMERA Roman Valls VAMATHEVAN Jessica VARMA Susheel VEARS Danya F VINER Coby VOISIN Craig WAGNER Alex H WALLACE Susan E WALSH Brian P WILLIAMS Marc S WINKLER Eva C WOLD Barbara J WOOD Grant M WOOLLEY J Patrick YAMASAKI Chisato YATES Andrew D YUNG Christina K ZASS Lyndon J ZAYTSEVA Ksenia ZHANG Junjun GOODHAND Peter NORTH Kathryn BIRNEY Ewan
Article in Periodical
Cell Genomics, year: 2021, volume: 1, edition: 2, DOI
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Integration of Biobanks in National eHealth Ecosystems Facilitating Long-Term Longitudinal Clinical-Omics Studies and Citizens' Engagement in Research Through eHealthBioR.
ANTONIADES Athos PAPAIOANNOU Maria MALATRAS Apostolos PAPAGREGORIOU Gregory MULLER Heimo HOLUB Petr DELTAS Constantinos SCHIZAS Christos N
Article in Periodical
Frontiers in Digital Health, year: 2021