Project information
ELIXIR-CZ: Czech National Infrastructure for Biological Data
(ELIXIR CZ)
- Project Identification
- LM2023055
- Project Period
- 1/2023 - 12/2026
- Investor / Pogramme / Project type
-
Ministry of Education, Youth and Sports of the CR
- Large Infrastructures for Research, Development and Innovation
- MU Faculty or unit
- Central European Institute of Technology
- Other MU Faculty/Unit
- Institute of Computer Science
- Cooperating Organization
-
Institute of Microbiology of the ASCR, v. v. i.
Institute of Molecular Genetics of the ASCR, v. v. i.
Institute of Organic Chemistry and Biochemistry of the ASCR, v. v. i.
- Responsible person RNDr. Jiří Vondrášek, CSc.
University of South Bohemia České Budějovice
Palacký University, Olomouc
Prague Institute of Chemical Technology
University of West Bohemia in Pilsen
Czech Technical University Prague
St. Anne's University Hospital Brno
Biological Centre of the ASCR, v. v. i.
Institute of Biotechnology CAS
ELIXIR CZ is the national infrastructure for biological data in all Life Science disciplines including
environmental, agriculture and medical data. Its major aim is to provide open access to comprehensive
data resources both nationally and internationally, delivering tools and services to fulfil needs of the
national and international Life Science community operating on cutting edge levels of advanced
methodologies and computational technologies.
Sustainable Development Goals
Masaryk University is committed to the UN Sustainable Development Goals, which aim to improve the conditions and quality of life on our planet by 2030.
Publications
Total number of publications: 42
2024
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GASP: A Pan-Specific Predictor of Family 1 Glycosyltransferase Acceptor Specificity Enabled by a Pipeline for Substrate Feature Generation and Large-Scale Experimental Screening
ACS Omega, year: 2024, volume: 9, edition: 25, DOI
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GraSR: Protein structural embeddings of AlphaFold DB
Year: 2024, type:
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ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era
Nucleic Acids Research, year: 2024, volume: 52, edition: D1, DOI
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Large-scale annotation of biochemically relevant pockets and tunnels in cognate enzyme-ligand complexes
Journal of Cheminformatics, year: 2024, volume: 16, edition: 1, DOI
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Learning to design protein-protein interactions with enhanced generalization
12th International Conference on Learning Representations 2024, year: 2024
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LMI-10: Protein structural embeddings of AlphaFold DB
Year: 2024, type:
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LMI-30: Protein structural embeddings of AlphaFold DB
Year: 2024, type:
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Rare ring conformations in PDB: Facts or wishful thinking?
Year: 2024, type: Article in Periodical (without peer review)
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Region-specific gene expression profiling of early mouse mandible uncovered SATB2 as a key molecule for teeth patterning
Scientific Reports, year: 2024, volume: 14, edition: 1, DOI
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Revealing data leakage in protein interaction benchmarks
ICLR 2024 Workshop on Generative and Experimental Perspectives for Biomolecular Design, year: 2024