Publication details

PRIMEX: rapid identification of oligonucleotide matches in whole genomes

Authors

LEXA Matej VALLE Giorgio

Year of publication 2003
Type Article in Periodical
Magazine / Source Bioinformatics
MU Faculty or unit

Faculty of Informatics

Citation
web Primex server
Field Computer hardware and software
Keywords genomic; sequence; DNA; rapid search; inexact matches; mismatches; PCR primers
Description PRIMEX can detect oligonucleotide sequences in whole genomes, allowing for mismatches. Using a word lookup table and server functionality, PRIMEX accepts queries from client software and returns matches rapidly. We find it faster and more sensitive than currently available tools.

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