Informace o publikaci

Integrative taxonomic revision of the African thicket rats (Murinae: Grammomys): how genomics decreases the number of currently recognized species

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BRYJA Josef PETERHANS Julian C Kerbis LAVRENCHENKO Leonid A NICOLAS Violaine DENYS Christiane BRYJOVA Anna SUMBERA Radim MIKULA Ondrej

Rok publikování 2025
Druh Článek v odborném periodiku
Časopis / Zdroj Zoological Journal of the Linnean Society
Fakulta / Pracoviště MU

Přírodovědecká fakulta

Citace
www https://doi.org/10.1093/zoolinnean/zlae057
Doi http://dx.doi.org/10.1093/zoolinnean/zlae057
Klíčová slova cytochrome b; double-digest restriction site-associated DNA sequencing; geometric morphometry; integrative taxonomy; Muridae; species delimitation
Popis Thicket rats of the genus Grammomys are partly arboreal rodents distributed across a large part of sub-Saharan Africa. Previous work showed that their highest diversity is in forests and woodlands of Eastern Africa, that the evolutionary history of the genus roughly mirrors the evolution of African forests, and that the currently delimited species (names) do not correspond to major genetic clades. We used thousands of single nucleotide polymorphisms to perform phylogenomic analysis and to delimit genomic pools (i.e. candidate biological species). The resulting molecular operational taxonomic units were then compared with the most comprehensive sets of other available data (mitochondrial DNA variability, ecological requirements, morphology, karyotypes, sequences from the type material, etc.) and used for an integrative solution to the taxonomy of the genus. Our revision delimited seven species, which is less than the 12 recognized in the most recent literature on African rodents. We conclude that the African thicket rats represent a classic example of challenging problems in current integrative taxonomy. It is now relatively easy to obtain genomic data and to delimit candidate species, but it is much more complicated to give them species names using the valid rules of zoological nomenclature.

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