Loschmidt Laboratories of Protein Engineering

Articles

• A closed 3D printed microfluidic device for automated growth and differentiation of cerebral organoids from single-cell suspension

  KANDRA Mário VÁŇOVÁ Tereza JONGEN Vincent Alexander POSPÍŠIL Jakub NOVAK Josef CHOCHOLA Václav BURYSKA Tomas PROKOP Zbyněk HODNY Zdenek HAMPL Aleš BOHAČIAKOVÁ Dáša JAROŠ Josef

  Article in Periodical

  Biotechnology Journal, year: 2024, volume: 19, edition: 8, DOI

• A computational workflow for analysis of missense mutations in precision oncology

  KHAN Rayyan Tariq POKORNÁ Petra DVORSKÝ Jan BORKO Simeon AREFIEV Ihor PLANAS IGLESIAS Joan DOBIÁŠ Adam RANGEL PAMPLONA PIZARRO PINTO José Gaspar SZOTKOWSKÁ Veronika ŠTĚRBA Jaroslav SLABÝ Ondřej DAMBORSKÝ Jiří MAZURENKO Stanislav BEDNÁŘ David

  Article in Periodical

  JOURNAL OF CHEMINFORMATICS, year: 2024, volume: 16, edition: 1, DOI

• AggreProt: a web server for predicting and engineering aggregation prone regions in proteins

  PLANAS IGLESIAS Joan BORKO Simeon SWIATKOWSKI Jan ELIAS Matej HAVLÁSEK Martin SALAMON Ondrej GRAKOVA Ekaterina KUNKA Antonín MARTINOVIC Tomas DAMBORSKÝ Jiří MARTINOVIC Jan BEDNÁŘ David

  Article in Periodical

  Nucleic acids research, year: 2024, volume: 52, edition: W1, DOI

• Azobenzene-Based Photoswitchable Substrates for Advanced Mechanistic Studies of Model Haloalkane Dehalogenase Enzyme Family

  SLÁNSKÁ Michaela ŠTACKOVÁ Lenka MARQUES Sérgio Manuel ŠTACKO Peter MARTÍNEK Marek JÍLEK Luboš TOUL Martin DAMBORSKÝ Jiří BEDNÁŘ David KLÁN Petr PROKOP Zbyněk

  Article in Periodical

  ACS Catalysis, year: 2024, volume: 14, edition: 15, DOI

• Bacterial Lactonases ZenA with Noncanonical Structural Features Hydrolyze the Mycotoxin Zearalenone

  FRUHAUF Sebastian PUHRINGER Dominic THAMHESL Michaela FAJTL Patricia KUNZ-VEKIRU Elisavet HOBARTNER-GUSSL Andreas SCHATZMAYR Gerd ADAM Gerhard DAMBORSKÝ Jiří DJINOVIC-CARUGO Kristina PROKOP Zbyněk MOLL Wulf-Dieter

  Article in Periodical

  ACS Catalysis, year: 2024, volume: 14, edition: 5, DOI

• BenchStab: A tool for automated querying of web-based stability predictors

  VELECKÝ Jan BEREZNÝ Matej MUSIL Miloš DAMBORSKÝ Jiří BEDNÁŘ David MAZURENKO Stanislav

  Article in Periodical

  BIOINFORMATICS, year: 2024, volume: 40, edition: 9, DOI

• Biochemical evidence for conformational variants in the anti-viral and pro-metastatic protein IFITM1

  NEKULOVÁ Marta WYSZKOWSKA Marta FRIEDLOVÁ Nela UHRÍK Lukáš ZAVADIL KOKÁŠ Filip HRABAL Václav HERNYCHOVÁ Lenka VOJTĚŠEK Bořivoj HUPP Ted R. SZYMAŃSKI Michał

  Article in Periodical

  BIOLOGICAL CHEMISTRY, year: 2024, DOI

• Computer-aided engineering of stabilized fibroblast growth factor 21

  DE LA BOURDONNAYE Gabin GHAZALOVÁ Tereza FOJTÍK Petr KUTALKOVA Katerina BEDNÁŘ David DAMBORSKÝ Jiří ROTREKL Vladimír STEPANKOVA Veronika CHALOUPKOVÁ Radka

  Article in Periodical

  Computational and Structural Biotechnology Journal, year: 2024, volume: 23, edition: December 2024, DOI

• CoVAMPnet: Comparative Markov State Analysis for Studying Effects of Drug Candidates on Disordered Biomolecules

  MARQUES Sérgio Manuel KOUBA Petr LEGRAND Anthony Thomas P SEDLAR Jiri DISSON Lucas PLANAS IGLESIAS Joan SANUSI Zainab Kemi KUNKA Antonín DAMBORSKÝ Jiří PAJDLA Tomas PROKOP Zbyněk MAZURENKO Stanislav SIVIC Josef BEDNÁŘ David

  Article in Periodical

  JACS AU, year: 2024, volume: 4, edition: 6, DOI

• Effects of three tebuconazole nanopesticides on the survival of <i>Daphnia magna</i>

  EGHBALINEJAD Mahleh LÓPEZ CABEZA María del Rocío KOTOUČEK Jan GRILLO Renato KOUTNY Marek HOCHMANOVÁ Zuzana HOFMAN Jakub

  Article in Periodical

  Environmental Science: Nano, year: 2024, volume: 11, edition: 3, DOI