Mgr. Petr Padrta, Ph.D.

2023

• Detailed insight into dynamics of C-terminal domain of δ subunit of RNA polymerase from Bacillus subtilis using high-resolution relaxometry

  KADEŘÁVEK Pavel ZAPLETAL Vojtěch SALVI Nicola JASEŇÁKOVÁ Zuzana ZACHRDLA Milan PADRTA Petr NARASIMHAN Subhash MARQUARDSEN Thorsten TYBURN Jean-Max ŽÍDEK Lukáš BLACKLEDGE Martin FERRAGE Fabien

  Year: 2023, type:

• Detailed insight into dynamics of intrinsically disordered proteins using high-resolution relaxometry

  ZAPLETAL Vojtěch SALVI Nicola FLAMM Andrea JASEŇÁKOVÁ Zuzana KURZBACH Dennis BORJA Mateos ZACHRDLA Milan PADRTA Petr NARASIMHAN Subhash MARQUARDSEN Thorsten TYBURN Jean-Max HRITZ Jozef KONRAT Robert ŽÍDEK Lukáš BLACKLEDGE Martin FERRAGE Fabien KADEŘÁVEK Pavel

  Appeared in Conference without Proceedings

  Year: 2023, type: Appeared in Conference without Proceedings

• Domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis beyond its major state conformation

  TUŽINČIN Dávid PADRTA Petr ŠANDEROVÁ Hana RABATINOVÁ Alžběta BENDOVÁ Kateřina KRÁSNÝ Libor ŽÍDEK Lukáš KADEŘÁVEK Pavel

  Conference abstract

  Year: 2023, type: Conference abstract

• Characterisation of invisible conformation of domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis

  TUŽINČIN Dávid PADRTA Petr ŠANDEROVÁ Hana RABATINOVÁ Alžběta KRÁSNÝ Libor ŽÍDEK Lukáš KADEŘÁVEK Pavel

  Conference abstract

  Year: 2023, type: Conference abstract

• Characterization of a transitionally occupied state and thermal unfolding of domain 1.1 of σ A factor of RNA polymerase from Bacillus subtilis

  TUŽINČIN Dávid PADRTA Petr ŠANDEROVÁ Hana RABATINOVÁ Alžbeta BENDOVÁ Kateřina KRÁSNÝ Libor ŽÍDEK Lukáš KADEŘÁVEK Pavel

  Article in Periodical

  Proteins: Structure, Function and Bioinformatics, year: 2023, volume: 91, edition: 9, DOI

• Study of the Dynamics of Flexible Subunits of RNA Polymerase from Bacillus subtilis

  TUŽINČIN Dávid SALVI Nicola ZAPLETAL Vojtěch JASEŇÁKOVÁ Zuzana ZACHRDLA Milan PADRTA Petr NARASIMHAN Subhash MARQUARDSEN Thorsten TYBURN Jean-Max ŠANDEROVÁ Hana RABATINOVÁ Alžběta BENDOVÁ Kateřina KRÁSNÝ Libor ŽÍDEK Lukáš BLACKLEDGE Martin FERRAGE Fabien KADEŘÁVEK Pavel

  Year: 2023, type:

2022

• Convergent views on disordered protein dynamics from NMR and computational approaches

  SALVI Nicola ZAPLETAL Vojtěch JASEŇÁKOVÁ Zuzana ZACHRDLA Milan PADRTA Petr NARASIMHAN Subhash MARQUARDSEN Thorsten TYBURN Jean-Max ŽÍDEK Lukáš BLACKLEDGE Martin FERRAGE Fabien KADEŘÁVEK Pavel

  Article in Periodical

  BIOPHYSICAL JOURNAL, year: 2022, volume: 121, edition: 20, DOI

• Seeing the invisible – Study of transiently formed protein conformation found in domain 1.1 of bacterial transcription factor

  TUŽINČIN Dávid KADEŘÁVEK Pavel PADRTA Petr ŽÍDEK Lukáš

  Appeared in Conference without Proceedings

  Year: 2022, type: Appeared in Conference without Proceedings

2020

• Boosting the resolution of low-field 15N relaxation experiments on intrinsically disordered proteins with triple-resonance NMR

  JASEŇÁKOVÁ Zuzana ZAPLETAL Vojtěch PADRTA Petr ZACHRDLA Milan BOLIK-COULON N. MARQUARDSEN T. TYBURN J.M. ŽÍDEK Lukáš FERRAGE F. KADEŘÁVEK Pavel

  Article in Periodical

  Journal of biomolecular NMR, year: 2020, volume: 74, edition: 2-3, DOI

2019

• Quantitative Conformational Analysis of Functionally Important Electrostatic Interactions in the Intrinsically Disordered Region of Delta Subunit of Bacterial RNA Polymerase

  KUBÁŇ Vojtěch SRB Pavel ŠTÉGNEROVÁ Hana PADRTA Petr ZACHRDLA Milan JASEŇÁKOVÁ Zuzana SANDEROVA H. VITOVSKA D. KRASNY L. KOVAL T. DOHNALEK J. ZIEMSKA-LEGIECKA J. GRYNBERG M. JARNOT P. GRUCA A. JENSEN M.R. BLACKLEDGE M. ŽÍDEK Lukáš

  Article in Periodical

  Journal of the American Chemical Society, year: 2019, volume: 141, edition: 42, DOI