Mgr. Petr Padrta, Ph.D.

2019

• Quantitative Conformational Analysis of Functionally Important Electrostatic Interactions in the Intrinsically Disordered Region of Delta Subunit of Bacterial RNA Polymerase

  KUBÁŇ Vojtěch SRB Pavel ŠTÉGNEROVÁ Hana PADRTA Petr ZACHRDLA Milan JASEŇÁKOVÁ Zuzana SANDEROVA H. VITOVSKA D. KRASNY L. KOVAL T. DOHNALEK J. ZIEMSKA-LEGIECKA J. GRYNBERG M. JARNOT P. GRUCA A. JENSEN M.R. BLACKLEDGE M. ŽÍDEK Lukáš

  Article in Periodical

  Journal of the American Chemical Society, year: 2019, volume: 141, edition: 42, DOI

2017

• Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana

  OTRUSINOVÁ Olga DEMO Gabriel PADRTA Petr JASEŇÁKOVÁ Zuzana PEKÁROVÁ Blanka GELOVÁ Zuzana SZMITKOWSKA Agnieszka KADEŘÁVEK Pavel JANSEN Séverine ZACHRDLA Milan KLUMPLER Tomáš MAREK Jaromír HRITZ Jozef JANDA Lubomír IWAI Hideo WIMMEROVÁ Michaela HEJÁTKO Jan ŽÍDEK Lukáš

  Article in Periodical

  Journal of Biological Chemistry, year: 2017, volume: 292, edition: 42, DOI

• Solution structure of domain 1.1 of the sigma(A) factor from Bacillus subtilis is preformed for binding to the RNA polymerase core

  ZACHRDLA Milan PADRTA Petr RABATINOVA Alzbeta SANDEROVA Hana BARVIK Ivan KRASNY Libor ŽÍDEK Lukáš

  Article in Periodical

  Journal of Biological Chemistry, year: 2017, volume: 292, edition: 28, DOI

2016

• Spectral density mapping at multiple magnetic fields suitable for C-13 NMR relaxation studies

  KADEŘÁVEK Pavel ZAPLETAL Vojtěch FIALA Radovan SRB Pavel PADRTA Petr PAVLÍKOVÁ PŘECECHTĚLOVÁ Jana ŠOLTÉSOVÁ Mária KOWALEWSKI Jozef WIDMALM Göran CHMELÍK Josef SKLENÁŘ Vladimír ŽÍDEK Lukáš

  Article in Periodical

  Journal of Magnetic Resonance, year: 2016, volume: 266, edition: May, DOI

2011

• Complementation of 3D structure of delta subunit of RNA polymerase from Bacillus subtilis with description of internal motions in terms of reduced spectral density mapping

  KADEŘÁVEK Pavel DIEHL Carl PAPOUŠKOVÁ Veronika ŠANDEROVÁ Hana PADRTA Petr ŽÍDEK Lukáš KRÁSNÝ Libor SKLENÁŘ Vladimír AKKE Mikael

  Article in Periodical

  MATERIALS STRUCTURE, year: 2011, volume: 18, edition: 1

• Study of RNA polymerase delta subunit unique for gram-positive bacteria

  PAPOUŠKOVÁ Veronika KADEŘÁVEK Pavel NOVÁČEK Jiří PADRTA Petr HANA Šanderová ALŽBĚTA Rabatinová ANNA Zawadzka-Kazimierczuk KRZYSZTOF Kazimierczuk ŽÍDEK Lukáš WIKTOR Kozminski LIBOR Krásný SKLENÁŘ Vladimír

  Conference abstract

  Year: 2011, type: Conference abstract

2010

• S3EPY: a Sparky extension for determination of small scalar couplings from spin-state-selective excitation NMR experiments

  NOVÁK Petr ŽÍDEK Lukáš MOTÁČKOVÁ Veronika PADRTA Petr ŠVENKOVÁ Alžbeta NUZILLARD Jean Marc KRÁSNÝ Libor SKLENÁŘ Vladimír

  Article in Periodical

  Journal of Biomolecular NMR, year: 2010, volume: 46, edition: 2

• Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase and its classification based on structural homologs

  MOTÁČKOVÁ Veronika ŠANDEROVÁ Hana ŽÍDEK Lukáš NOVÁČEK Jiří PADRTA Petr ŠVENKOVÁ Alžběta KORELUSOVÁ Jana JONÁK Jiří KRÁSNÝ Libor SKLENÁŘ Vladimír

  Article in Periodical

  Proteins: Structure, Function, and Bioinformatics, year: 2010, volume: 78, edition: 7

• Structure and dynamics of an RNA polymerase subunit unique for gram-positive bacteria

  MOTÁČKOVÁ Veronika KADEŘÁVEK Pavel ŽÍDEK Lukáš ŠANDEROVÁ Hana PADRTA Petr NOVÁČEK Jiří ŠVENKOVÁ Alžběta KORELUSOVÁ Jana ZAWADZKA-KAZIMIERCZUK Anna KAZIMIERCZUK Krzysztof KOŹMIŃSKI Wiktor KRÁSNÝ Libor SKLENÁŘ Vladimír

  Conference abstract

  Year: 2010, type: Conference abstract

• Structure and dynamics of delta subunit of RNA polymerase from Bacillus subtilis

  KADEŘÁVEK Pavel MOTÁČKOVÁ Veronika PADRTA Petr DIEHL Carl ŠANDEROVÁ Hana ŽÍDEK Lukáš KRÁSNÝ Libor SKLENÁŘ Vladimír AKKE Mikael

  Conference abstract

  Year: 2010, type: Conference abstract