doc. RNDr. Pavel Matula, Ph.D.

2016

• DNA double strand breaks detection in pluripotent stem cells with regard to cell cycle stages

  ŠIMARA Pavel KRONTORÁD KOUTNÁ Irena TESAŘOVÁ Lenka ŘEHÁKOVÁ Daniela MATULA Pavel

  Conference abstract

  Year: 2016, type: Conference abstract

• Genomic Stability of the Cells during hiPSC Reprogramming and Endothelial Differentiation

  ŠIMARA Pavel TESAŘOVÁ Lenka ŘEHÁKOVÁ Daniela MATULA Pavel KRONTORÁD KOUTNÁ Irena

  Conference abstract

  Year: 2016, type: Conference abstract

2015

• Cell tracking accuracy measurement based on comparison of acyclic oriented graphs

  MATULA Pavel MAŠKA Martin SOROKIN Dmitry MATULA Petr ORTIZ-DE-SOLÓRZANO Carlos KOZUBEK Michal

  Article in Periodical

  PLoS ONE, year: 2015, volume: 10, edition: 12, DOI

• Derivation of human induced pluripotent stem cells and Advanced Methods of Image Processing

  KRONTORÁD KOUTNÁ Irena ŠIMARA Pavel MATULA Pavel TESAŘOVÁ Lenka ŠALINGOVÁ Barbara

  Year: 2015, type:

• Localized movement and morphology of UBF1-positive nucleolar regions are changed by gamma-irradiation in G2 phase of the cell cycle

  SOROKIN Dmitry STIXOVÁ Lenka SEHNALOVÁ Petra LEGARTOVÁ Soňa SUCHÁNKOVÁ Jana ŠIMARA Pavel KOZUBEK Stanislav MATULA Pavel SKALNÍKOVÁ Magdalena RAŠKA Ivan BÁRTOVÁ Eva

  Article in Periodical

  Nucleus, year: 2015, volume: 6, edition: 4, DOI

• Performance and Sensitivity Evaluation of 3-D Spot Detection Methods in Confocal Microscopy

  ŠTĚPKA Karel MATULA Pavel MATULA Petr WOERZ Stefan ROHR Karl KOZUBEK Michal

  Article in Periodical

  Cytometry Part A, year: 2015, volume: 87A, edition: 8, DOI

2014

• A Benchmark for Comparison of Cell Tracking Algorithms

  MAŠKA Martin ULMAN Vladimír SVOBODA David MATULA Pavel MATULA Petr EDERRA Cristina URBIOLA Ainhoa ESPANA Tomás VENKATESAN Subramanian BALAK Deepak M W KARAS Pavel BOLCKOVÁ Tereza ŠTREITOVÁ Markéta CARTHEL Craig CORALUPPI Stefano HARDER Nathalie ROHR Karl MAGNUSSON Klas E G JALDÉN Joakim BLAU Helen M DZYUBACHYK Oleh KŘÍŽEK Pavel HAGEN Guy M PASTOR-ESCUREDO David JIMENEZ-CARRETERO Daniel LEDESMA-CARBAYO Maria J MUNOZ-BARRUTIA Arrate MEIJERING Erik KOZUBEK Michal ORTIZ-DE-SOLORZANO Carlos

  Article in Periodical

  Bioinformatics, year: 2014, volume: 30, edition: 11, DOI

• A simple Fourier filter for suppression of the missing wedge ray artefacts in single-axis electron tomographic reconstructions

  KOVÁČIK Lubomír KEREICHE Sami HÖÖG Johanna JŮDA Pavel MATULA Pavel RAŠKA Ivan

  Article in Periodical

  Journal of Structural Biology, year: 2014, volume: 186, edition: 1, DOI

• HP1B-dependent recruitment of UBF1 to irradiated chromatin occurs simultaneously with CPDs

  STIXOVÁ Lenka SEHNALOVÁ Petra LEGARTOVÁ Soňa SUCHÁNKOVÁ Jana HRUŠKOVÁ Tereza KOZUBEK Stanislav SOROKIN Dmitry MATULA Pavel RAŠKA Ivan KOVAŘÍK Aleš FULNEČEK Jaroslav BÁRTOVÁ Eva

  Article in Periodical

  Epigenetics & Chromatin, year: 2014, volume: 7, edition: 39, DOI

• NON-RIGID CONTOUR-BASED TEMPORAL REGISTRATION OF 2D CELL NUCLEI IMAGES USING THE NAVIER EQUATION

  SOROKIN Dmitry TEKTONIDIS Marco ROHR Karl MATULA Pavel

  Article in Proceedings

  IEEE International Symposium on Biomedical Imaging: Nano to Macro, year: 2014