RNDr. Tomáš Raček, Ph.D.

Deputy Core Facility Leader, Biological Data Management and Analysis Core Facility

office: bldg. C04/234
Kamenice 753/5
625 00 Brno

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e‑mail:	tomas.racek@muni.cz

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Basic information

Type

Total number of publications: 40

2024

Analysis and Visualization of Protein Channels, Tunnels, and Pores with MOLEonline and ChannelsDB 2.0

ŠPAČKOVÁ Anna BAZGIER Václav RAČEK Tomáš SEHNAL David SVOBODOVÁ Radka BERKA Karel

Chapter of a book

Protein Bioinformatics, edition: Vyd. 1, year: 2024, number of pages: 15 s.
Data Management of Biological Imaging Data

SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš SVOBODOVÁ Radka

Appeared in Conference without Proceedings

Year: 2024, type: Appeared in Conference without Proceedings
ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era

ŠPAČKOVÁ Anna VÁVRA Ondřej RAČEK Tomáš BAZGIER Václav SEHNAL David DAMBORSKÝ Jiří SVOBODOVÁ Radka BEDNÁŘ David BERKA Karel

Article in Periodical

Nucleic Acids Research, year: 2024, volume: 52, edition: D1, DOI
RBP-Tar – a searchable database for experimental RBP binding sites

GREŠOVÁ Katarína RAČEK Tomáš MARTINEK Vlastimil ČECHÁK David SVOBODOVÁ Radka ALEXIOU Panagiotis

Article in Periodical

F1000Research, year: 2024, DOI
Scientific Dataset Management System for the Research Institute Based on Onedata

SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš HANDL Josef KŘENEK Aleš SVOBODOVÁ Radka

Conference abstract

Year: 2024, type: Conference abstract

2023

An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems.

LAMOTHE Lucie JENSEN Jennifer R B IENASESCU Hans GUSTAFSSON Ove J R GAIGNARD Alban REPCHEVSKY Dmitry SVOBODOVÁ Radka RAČEK Tomáš ROŠINEC Adrián ANTOL Matej MÉNAGER Hervé

Article in Periodical (without peer review)

Year: 2023, type: Article in Periodical (without peer review)
Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management

ROŠINEC Adrián SVOBODA Tomáš RAČEK Tomáš KŘENEK Aleš SVOBODOVÁ Radka

Appeared in Conference without Proceedings

Year: 2023, type: Appeared in Conference without Proceedings
ChannelsDB 2.0: A Comprehensive Database of Protein Tunnels and Pores in AlphaFold Era

ŠPAČKOVÁ Anna VÁVRA Ondřej RAČEK Tomáš BAZGIER Václav SEHNAL David DAMBORSKÝ Jiří SVOBODOVÁ Radka BERKA Karel

Conference abstract

Year: 2023, type: Conference abstract
Management of life-science data and their metadata

RAČEK Tomáš SVOBODA Tomáš SVOBODOVÁ Radka

Appeared in Conference without Proceedings

Year: 2023, type: Appeared in Conference without Proceedings
New ways of protein family visualization in AlphaFold era

SVOBODOVÁ Radka BERKA Karel HUTAŘOVÁ VAŘEKOVÁ Ivana RAČEK Tomáš SCHINDLER Ondřej

Appeared in Conference without Proceedings

Year: 2023, type: Appeared in Conference without Proceedings