doc. RNDr. Radka Svobodová, Ph.D.
Head of Core Facility, Biological Data Management and Analysis Core Facility
Office: bldg. C04/233
Kamenice 753/5
625 00 Brno
Phone: | +420 549 49 4860 |
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E‑mail: |
social and academic networks: |
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Field of study: Biomolecular Chemistry
Topics of doctoral theses (consultant)
- Methods and workflows for analysis of high-throughput sequencing data – graduate 2018
- Computational Methods to Analyze Free Space in Proteins – graduate 2018
- Detection and validation of biologically important structural motifs in biomacromolecules – graduate 2015
- Atomic Charges in Proteins – graduate 2013
Field of study: Biomolecular chemistry and bioinformatics
Topics of doctoral theses (supervisor)
- Analysis of rings conformations – ongoing study
- Development of workflows for analysis of protein structures – ongoing study
- Trends in biomolecular structure quality – ongoing study
- Metadata for annotation of experimental data in life sciences – ongoing study
- Bioinformatics workflows for management of experimental data – ongoing study
- Partial atomic charges for proteins – graduate 2024
- Visualization of protein structures, complexes, and annotations – graduate 2023
- Visualization of biomacromolecules – graduate 2023
- Validation of molecular 3D structures – graduate 2022
- Annotation and visualization of protein secondary structure – graduate 2022
Field of study: Biomolecular chemistry and bioinformatics
Topics of doctoral theses (supervisor)
- Chemoinformatical methods for prediction of physico-chemical properties of molecules – graduate 2021
Field of study: Bio-omics
Topics of doctoral theses (consultant)
- Deciphering the Role of Strigolactone Hormone in Plant Developmental Processes – graduate 2020
Field of study: Computer Systems and Technologies
Topics of doctoral theses (consultant)
- Methods for the Analysis of 3D Structural Fragments in Biomolecules – graduate 2015
Field of study: Computing Technology and Methodology
Topics of doctoral theses (consultant)
- Empirical methods for calculating partial atomic charges – graduate 2022