doc. RNDr. Radka Svobodová, Ph.D.

2024

• AlphaFind — discover structure similarity across the proteome in AlphaFold DB

  GREŠOVÁ Katarína ŠPRINGEROVÁ Pavlína SLANINÁKOVÁ Terézia PROCHÁZKA David OĽHA Jaroslav ROŠINEC Adrián JÁNOŠOVÁ Miriama ČILLÍK Jakub PORUBSKÁ Jana SVOBODOVÁ Radka DOHNAL Vlastislav ANTOL Matej

  Conference abstract

  Year: 2024, type: Conference abstract

• AlphaFind — discover structure similarity across the proteome in AlphaFold DB

  SLANINÁKOVÁ Terézia PROCHÁZKA David OĽHA Jaroslav ROŠINEC Adrián GREŠOVÁ Katarína ČILLÍK Jakub JÁNOŠOVÁ Miriama PORUBSKÁ Jana SVOBODOVÁ Radka DOHNAL Vlastislav ANTOL Matej

  Conference abstract

  Year: 2024, type: Conference abstract

• AlphaFind: Discover structure similarity across the entire known proteome

  PROCHÁZKA David SLANINÁKOVÁ Terézia OĽHA Jaroslav ROŠINEC Adrián GREŠOVÁ Katarína JÁNOŠOVÁ Miriama ČILLÍK Jakub PORUBSKÁ Jana SVOBODOVÁ Radka DOHNAL Vlastislav ANTOL Matej

  Year: 2024

• AlphaFind: discover structure similarity across the proteome in AlphaFold DB

  PROCHÁZKA David SLANINÁKOVÁ Terézia OĽHA Jaroslav ROŠINEC Adrián GREŠOVÁ Katarína JÁNOŠOVÁ Miriama ČILLÍK Jakub PORUBSKÁ Jana SVOBODOVÁ Radka DOHNAL Vlastislav ANTOL Matej

  Article in Periodical

  Nucleic acids research, year: 2024, volume: 52, edition: July 5, DOI

• CF Day 2023

  HOŠKOVÁ Kateřina FAJTLOVÁ Šárka PLEVKA Pavel MIKL Michal EŠNER Milan SVOBODOVÁ Radka TICHÝ Boris

  Popularization text

  Year: 2024, type: Popularization text

• Data Management and FAIRification in MAFIL

  SVOBODA Tomáš ČILLÍK Jakub MIKL Michal SLAVÍČEK Tomáš SVOBODOVÁ Radka

  Conference abstract

  Year: 2024, type: Conference abstract

• Data Management of Biological Imaging Data

  SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš SVOBODOVÁ Radka

  Appeared in Conference without Proceedings

  Year: 2024, type: Appeared in Conference without Proceedings

• Fast, structure-based searching in a large-scale protein data repository

  SLANINÁKOVÁ Terézia GREŠOVÁ Katarína PROCHÁZKA David SPIŠAKOVÁ Viktória ROŠINEC Adrián ČILLÍK Jakub ŠPRINGEROVÁ Pavlína KŘENEK Aleš DOHNAL Vlastislav SVOBODOVÁ Radka ANTOL Matej

  Conference abstract

  Year: 2024, type: Conference abstract

• ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era

  ŠPAČKOVÁ Anna VÁVRA Ondřej RAČEK Tomáš BAZGIER Václav SEHNAL David DAMBORSKÝ Jiří SVOBODOVÁ Radka BEDNÁŘ David BERKA Karel

  Article in Periodical

  Nucleic Acids Research, year: 2024, volume: 52, edition: D1, DOI

• Rare ring conformations in PDB: Facts or wishful thinking?

  BUČEKOVÁ Gabriela DOSHCHENKO Viktoriia CHARESHNEU Aliaksei PORUBSKÁ Jana PAJTINKA Michal OLEKSIK Michal SVOBODA Tomáš HORSKÝ Vladimír SVOBODOVÁ Radka

  Article in Periodical (without peer review)

  Year: 2024, type: Article in Periodical (without peer review)