RNDr. Vladimír Ulman, Ph.D.

2017

• MitoGen: A Framework for Generating 3D Synthetic Time-Lapse Sequences of Cell Populations in Fluorescence Microscopy

  SVOBODA David ULMAN Vladimír

  Article in Periodical

  IEEE Transactions on Medical Imaging, year: 2017, volume: 36, edition: 1, DOI

• Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Motile Cells with Growing Filopodia

  SOROKIN Dmitry PETERLÍK Igor ULMAN Vladimír SVOBODA David MAŠKA Martin

  Article in Proceedings

  14th IEEE International Symposium on Biomedical Imaging, year: 2017

2016

• Vascular Network Formation in Silico Using the Extended Cellular Potts Model

  SVOBODA David ULMAN Vladimír KOVÁČ Peter ŠALINGOVÁ Barbara TESAŘOVÁ Lenka KRONTORÁD KOUTNÁ Irena MATULA Petr

  Article in Proceedings

  2016 IEEE International Conference on Image Processing, year: 2016

• Virtual cell imaging: A review on simulation methods employed in image cytometry

  ULMAN Vladimír SVOBODA David NYKTER Matti KOZUBEK Michal RUUSUVUORI Pekka

  Article in Periodical

  Cytometry Part A, year: 2016, volume: 89A, edition: 12, DOI

2015

• On Proper Simulation of Chromatin Structure in Static Images As Well As in Time-Lapse Sequences in Fluorescence Microscopy

  SVOBODA David ULMAN Vladimír PETERLÍK Igor

  Article in Proceedings

  Proceedings of 2015 IEEE International Symposium on Biomedical Imaging, year: 2015

• TRAgen: A Tool for Generation of Synthetic Time-Lapse Image Sequences of Living Cells

  ULMAN Vladimír ORÉMUŠ Zoltán SVOBODA David

  Article in Proceedings

  Proceedings of 18th International Conference on Image Analysis and Processing, year: 2015

2014

• A Benchmark for Comparison of Cell Tracking Algorithms

  MAŠKA Martin ULMAN Vladimír SVOBODA David MATULA Pavel MATULA Petr EDERRA Cristina URBIOLA Ainhoa ESPANA Tomás VENKATESAN Subramanian BALAK Deepak M W KARAS Pavel BOLCKOVÁ Tereza ŠTREITOVÁ Markéta CARTHEL Craig CORALUPPI Stefano HARDER Nathalie ROHR Karl MAGNUSSON Klas E G JALDÉN Joakim BLAU Helen M DZYUBACHYK Oleh KŘÍŽEK Pavel HAGEN Guy M PASTOR-ESCUREDO David JIMENEZ-CARRETERO Daniel LEDESMA-CARBAYO Maria J MUNOZ-BARRUTIA Arrate MEIJERING Erik KOZUBEK Michal ORTIZ-DE-SOLORZANO Carlos

  Article in Periodical

  Bioinformatics, year: 2014, volume: 30, edition: 11, DOI

• On Proper Simulation of Phenomena Influencing Image Formation in Fluorescence Microscopy

  SVOBODA David ULMAN Vladimír MATYSKA Luděk MAŠKA Martin BELLA Ján STEJSKAL Stanislav

  Article in Proceedings

  2014 IEEE International Conference on Image Processing, year: 2014

2013

• CytoPacq v2.0

  SVOBODA David MATYSKA Luděk ULMAN Vladimír

  Year: 2013

• Towards a Realistic Distribution of Cells in Synthetically Generated 3D Cell Populations

  SVOBODA David ULMAN Vladimír

  Article in Proceedings

  17th International Conference on Image Analysis and Processing - ICIAP 2013, year: 2013