Project information
Comprehensive prognostic and predictive panel for chronic lymphocytic leukemia: a next-generation sequencing tool suitable for clinical practice and study of genetic architecture behind the disease progress
- Project Identification
- NV19-03-00091
- Project Period
- 5/2019 - 12/2022
- Investor / Pogramme / Project type
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Ministry of Health of the CR
- Ministry of Health Research Programme 2015 - 2022
- MU Faculty or unit
- Central European Institute of Technology
- Cooperating Organization
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University Hospital Brno-Bohunice
- Responsible person Mgr. Veronika Navrkalová, Ph.D.
Chronic lymphocytic leukemia (CLL) is common and still incurable leukemia of adults characterized by remarkable genetic and clinical heterogeneity. In proposed project we aim to study genetic background underlying clonal evolution of genomic alterations in treatment naïve CLL patients taking the advantage of availability of consecutive samples collected during disease course. Our main objective is to early disclose the disease progression and therapy need. We plan to assess both the prognostic and the predictive value of genomic aberrations detected just before treatment start. For this purpose, a highly complex next-generation sequencing (NGS) tool analyzing simultaneously both fundamental, as well as novel CLL biomarkers will be implemented. We employ benefits of capture-based NGS technology enabling to analyze in one test IGHV mutational status, recurrent chromosomal and gene defects, and Ig light chains clonality. We presume that our NGS panel tailored for CLL can be widely adopted in clinical practice as a simple comprehensive test for better patient prognostication.
Publications
Total number of publications: 48
2021
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Low-burden TP53 mutations in CLL: clinical impact and clonal evolution within the context of different treatment options
Blood, year: 2021, volume: 138, edition: 25, DOI
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LYNX (Lymphoid next-generation sequencing): NGS panel a bioinformatic tool for integrative analysis of prognostic and predictive markers in B-cell malignancies.
Year: 2021, type: Conference abstract
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LYNX (Lymphoid next-generation sequencing): NGS panel a bioinformatický nástroj pro integrativní analýzu prognostických a prediktivních markerů B-buněčných lymfoproliferací.
Year: 2021, type: Conference abstract
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LYNX: an interactive bioinformatic tool for capture-based next-generation sequencing data analysis in lymphoid malignancies.
Year: 2021, type: Conference abstract
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Maskovaná hypodiploidie u pacientů s akutní lymfoblastickou leukémií
Year: 2021, type: Conference abstract
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RPS15 mutations rewire RNA translation in chronic lymphocytic leukemia
BLOOD ADVANCES, year: 2021, volume: 5, edition: 13, DOI
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T-buněčný lymfoblastický lymfom (T-LBL) dětského věku s kazuistikou geneticky zajímavého případu
Year: 2021, type: Conference abstract
2020
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Capture-based NGS panel for detection of immunoglobulin and T-cell receptor gene rearrangements in DNA samples from patients with acute lymphoblastic leukemia
Year: 2020, type: Conference abstract
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International prognostic score for asymptomatic early-stage chronic lymphocytic leukemia
Blood, year: 2020, volume: 135, edition: 21, DOI
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LYNX – modulární bioinformatický nástroj s uživatelským rozhraním pro analýzu NGS da u pacientů s hematologickými malignitami
Year: 2020, type: Conference abstract