Project information
Dynamics and thermodynamics of mouse pheromone - protein complexes
- Project Identification
- GA203/00/0511
- Project Period
- 1/2000 - 1/2002
- Investor / Pogramme / Project type
-
Czech Science Foundation
- Standard Projects
- MU Faculty or unit
-
Faculty of Science
- prof. RNDr. Vladimír Sklenář, DrSc.
- Cooperating Organization
-
Indiana University
- Responsible person prof. Miloš Novotný, Ph.D.
The project proposed here focuses on ligand-induced changes in dynamics of pheromone-binding proteins. Mouse MUP-I, previously studied by the joint applicant, was chosen as a protein model. Dynamic parameters describing amide bond motions will be estimat ed from relaxation data for the free protein and for MUP-I complexed with a native pheromone and pheromone analogs. Following introduction of advanced techniques of isotope labeling (alternating 13C labeling with partial deuteration), the dynamic measure ments will be extended to side-chain C-H bonds. Effects of ligand binding on conformational entropy will be evaluated from values of the order parameter and compared with calorimetric data. Computational methods will be introduced to address other free e nergy changes upon ligand binding. Solution structures of free MUP-I and of its complex with the bound pheromone will be solved by NMR and compared with crystal structure obtained by a collaborating group. Application of the mentioned methodology to MUP-
Publications
Total number of publications: 2
2004
-
Temperature Dependent Spectral Density Analysis Applied to Monitoring Backbone Dynamics of Major Urinary Protein-I Complexed with the Pheromone 2-sec-Butyl-4,5-dihydrothiazole
Journal of Biomolecular NMR, year: 2004, volume: 28, edition: 4
2002
-
Pheromone binding by polymorphic mouse major urinary proteins
Protein Science, year: 2002, volume: 11, edition: 11