Publication details
BCSgen: Biochemical Space language software tool
| Authors | |
|---|---|
| Year of publication | 2017 |
| MU Faculty or unit | |
| Web | https://sybila.fi.muni.cz/tools_html/bsgen.html |
| Description | BCSgen is a software providing basic functionality to write, maintain, and analyse models written in Biochemical Space Language (BCSL). The key features of the tool are: interactive editor which allows users to create and load models providing automatic syntax highlighting and errors reporting; transition system analysis allows to generate transition system for a given model and consequently analyse it (e.g. perform reachability analysis); simulation of a model with defined kinetic rates with either deterministic or stochastic approach; visualisation of simulated data in an interactive plot chart and visualisation of transition system in a web-based visualisation for exploration of whole space. |
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