doc. RNDr. Radka Svobodová, Ph.D.

2018

• ChannelsDB: database of biomacromolecular tunnels and pores

  PRAVDA Lukáš SEHNAL David SVOBODOVÁ VAŘEKOVÁ Radka NAVRÁTILOVÁ Veronika TOUŠEK Dominik BERKA Karel OTYEPKA Michal KOČA Jaroslav

  Article in Periodical

  Nucleic Acids Research, year: 2018, volume: 46, edition: D1, DOI

• Interactive 3D Macromolecular Structure Data Mining with MolQL and Litemol Suite

  SEHNAL David DESHPANDE M ROSE A PRAVDA Lukáš MIDLIK Adam SVOBODOVÁ VAŘEKOVÁ Radka MIR S BERKA K VELANKAR S KOČA Jaroslav

  Conference abstract

  Year: 2018, type: Conference abstract

• Lesson development for Open Source Software best practices adoption

  KUZAK M. HARROW J. JIMENEZ R.C. MARTINEZ P.A. PSOMOPOULOS F.E. SVOBODOVÁ VAŘEKOVÁ Radka VIA A.

  Article in Proceedings

  2018 IEEE 14TH INTERNATIONAL CONFERENCE ON E-SCIENCE (E-SCIENCE 2018), year: 2018

• Molecular evolution and diversification of the SMXL gene family

  MOTURU Tarakaramji THULA Sravankumar SINGH R.K. NODZYNSKI Tomasz SVOBODOVÁ VAŘEKOVÁ Radka FRIML J. SIMON Sibu

  Article in Periodical

  Journal of Experimental Botany, year: 2018, volume: 69, edition: 9, DOI

• MOLEonline: a web-based tool for analyzing channels, tunnels and pores (2018 update)

  PRAVDA Lukáš SEHNAL David TOUŠEK Dominik NAVRÁTILOVÁ Veronika BAZGIER Václav BERKA Karel SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav OTYEPKA Michal

  Article in Periodical

  Nucleic Acids Research, year: 2018, volume: 46, edition: W1, DOI

• PDBsum: Structural summaries of PDB entries

  LASKOWSKI R.A. JABŁOŃSKA Jagoda PRAVDA Lukáš SVOBODOVÁ VAŘEKOVÁ Radka THORNTON Janet M

  Article in Periodical

  Protein Science, year: 2018, volume: 27, edition: 1, DOI

• Protein family based 2D Diagrams of Secondary Structure Elements

  HUTAŘOVÁ VAŘEKOVÁ Ivana HUTAŘ Jan MIDLIK Adam NAVRÁTILOVÁ Veronika SVOBODOVÁ VAŘEKOVÁ Radka BERKA Karel

  Conference abstract

  Year: 2018, type: Conference abstract

• Secondary Structure Elements-Annotations and Schematic 2D Visualizations Stable for Individual Protein Families

  SVOBODOVÁ VAŘEKOVÁ Radka MIDLIK Adam HUTAŘOVÁ VAŘEKOVÁ Ivana HUTAŘ Jan NAVRÁTILOVÁ Veronika KOČA Jaroslav BERKA Karel

  Conference abstract

  Year: 2018, type: Conference abstract

• SugarSketcher: Quick and Intuitive Online Glycan Drawing

  ALOCCI Davide SUCHÁNKOVÁ Pavla COSTA Renaud HORY Nicolas MARIETHOZ Julien SVOBODOVÁ VAŘEKOVÁ Radka TOUKACH Philip LISACEK Frederique

  Article in Periodical

  Molecules, year: 2018, volume: 23, edition: 12, DOI

• Validation information in the Protein Data Bank: What is it and why should you care?

  SMART Oliver S. HORSKÝ Vladimír GORE Swanand SVOBODOVÁ VAŘEKOVÁ Radka BENDOVÁ Veronika KLEYWEGT Gerard J. VELANKAR Sameer

  Appeared in Conference without Proceedings

  Year: 2018, type: Appeared in Conference without Proceedings