doc. RNDr. Radka Svobodová, Ph.D.

Head of Core Facility, Biological Data Management and Analysis Core Facility

office: bldg. C04/233
Kamenice 753/5
625 00 Brno

phone:	+420 549 49 4860
e‑mail:

social and academic networks:

Basic information

Supervision

Qualifications

Publications

Type

Total number of publications: 179

2019

ValTrendsDB: Database of biomacromolecular structure validation trends

HORSKÝ Vladimír BENDOVÁ Veronika TOUŠEK Dominik KOČA Jaroslav SVOBODOVÁ VAŘEKOVÁ Radka

Year: 2019
ValTrendsDB: Enabling comparison of quality and features of biomacromolecular complexes to the global trend

HORSKÝ Vladimír BENDOVÁ Veronika TOUŠEK Dominik KOČA Jaroslav SVOBODOVÁ VAŘEKOVÁ Radka

Conference abstract

Year: 2019, type: Conference abstract

2018

Annotation of protein secondary structure elements for whole protein families

MIDLIK Adam HUTAŘOVÁ VAŘEKOVÁ Ivana HUTAŘ Jan NAVRÁTILOVÁ Veronika SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav BERKA Karel

Conference abstract

Year: 2018, type: Conference abstract
Automated Annotation of Secondary Structure Elements for Entire Protein Families

MIDLIK Adam HUTAŘOVÁ VAŘEKOVÁ Ivana HUTAŘ Jan MOTURU Tarakaramji NAVRÁTILOVÁ Veronika SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav BERKA Karel

Conference abstract

Year: 2018, type: Conference abstract
bio.tools Sum – tool for exploration of summary information about bioinformatics services in bio.tools

RAČEK Tomáš SVOBODOVÁ VAŘEKOVÁ Radka POLANSKÝ Dan BERKA Karel KOČA Jaroslav

Conference abstract

Year: 2018, type: Conference abstract
Bringing validation information closer to the user

SMART Oliver S. HORSKÝ Vladimír GORE Swanand SVOBODOVÁ VAŘEKOVÁ Radka BENDOVÁ Veronika KLEYWEGT Gerard J. VELANKAR Sameer

Appeared in Conference without Proceedings

Year: 2018, type: Appeared in Conference without Proceedings
CCL - Charge Calculation Language

RAČEK Tomáš SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

Conference abstract

Year: 2018, type: Conference abstract
Connection of glycoinformatics databases with Pubchem

SUCHÁNKOVÁ Pavla SVOBODOVÁ VAŘEKOVÁ Radka

Conference abstract

Year: 2018, type: Conference abstract
Empirical methods for calculation of partial atomic charges – applicability for proteins?

RAČEK Tomáš SCHINDLER Ondřej SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

Conference abstract

Year: 2018, type: Conference abstract
Family-wide annotation and schematic 2D visualization of secondary structure elements

SVOBODOVÁ VAŘEKOVÁ Radka HUTAŘOVÁ VAŘEKOVÁ Ivana MIDLIK Adam HUTAŘ Jan MOTURU Tarakaramji NAVRÁTILOVÁ Veronika KOČA Jaroslav BERKA Karel

Appeared in Conference without Proceedings

Year: 2018, type: Appeared in Conference without Proceedings

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doc. RNDr. Radka Svobodová, Ph.D.

2019

ValTrendsDB: Database of biomacromolecular structure validation trends

ValTrendsDB: Enabling comparison of quality and features of biomacromolecular complexes to the global trend

2018

Annotation of protein secondary structure elements for whole protein families

Automated Annotation of Secondary Structure Elements for Entire Protein Families

bio.tools Sum – tool for exploration of summary information about bioinformatics services in bio.tools

Bringing validation information closer to the user

CCL - Charge Calculation Language

Connection of glycoinformatics databases with Pubchem

Empirical methods for calculation of partial atomic charges – applicability for proteins?

Family-wide annotation and schematic 2D visualization of secondary structure elements