doc. RNDr. Radka Svobodová, Ph.D.

2012

• BH3-ONLY PROTEINS - FROM STRUCTURE TO FUNCTION

  IONESCU Crina-Maria KLÍMOVÁ Zuzana SEHNAL David SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2012, type: Appeared in Conference without Proceedings

• Charge Profile Analysis Reveals That Activation of Pro-apoptotic Regulators Bax and Bak Relies on Charge Transfer Mediated Allosteric Regulation

  IONESCU Crina-Maria SVOBODOVÁ VAŘEKOVÁ Radka PREHN Jochen HM HUBER Heinrich J KOČA Jaroslav

  Article in Periodical

  PLoS Computational Biology, year: 2012, volume: 8, edition: 6, DOI

• MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels

  BERKA Karel HANÁK Ondřej SEHNAL David BANÁŠ Pavel NAVRÁTILOVÁ Veronika JAISWAL Deepti IONESCU Crina-Maria SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav OTYEPKA Michal

  Article in Periodical

  Nucleic Acids Research, year: 2012, volume: 40, edition: W1, DOI

• Predicting pKa values of substituted phenols by QSPR models which employ EEM atomic charges

  GEIDL Stanislav SVOBODOVÁ VAŘEKOVÁ Radka IONESCU Crina-Maria SKŘEHOTA Ondřej BOUCHAL Tomáš KUDERA Michal SEHNAL David RUBEN Abagyan KOČA Jaroslav

  Conference abstract

  Year: 2012, type: Conference abstract

• Predikce pKa pro nově navržené molekuly léků

  GEIDL Stanislav BERÁNEK Roman SVOBODOVÁ VAŘEKOVÁ Radka BOUCHAL Tomáš KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2012, type: Appeared in Conference without Proceedings

• Protein Politics: How Neutral is Neutral?

  IONESCU Crina-Maria SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2012, type: Appeared in Conference without Proceedings

• Quantum Mechanical Evaluation of Charge Transfer inside Proteins

  IONESCU Crina-Maria SVOBODOVÁ VAŘEKOVÁ Radka KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2012, type: Appeared in Conference without Proceedings

• ROLE OF CHARGE TRANSFER IN THE ACTIVATION OF PRO-APOPTOTIC REGULATORS BAX AND BAK

  IONESCU Crina-Maria SVOBODOVÁ VAŘEKOVÁ Radka HUBER Heinrich J KOČA Jaroslav

  Appeared in Conference without Proceedings

  Year: 2012, type: Appeared in Conference without Proceedings

• SiteBinder: An improved approach for comparing multiple protein structural motifs

  SEHNAL David SVOBODOVÁ VAŘEKOVÁ Radka HUBER Heinrich J. GEIDL Stanislav IONESCU Crina-Maria WIMMEROVÁ Michaela KOČA Jaroslav

  Article in Periodical

  Journal of Chemical Information and Modeling, year: 2012, volume: 52, edition: 2, DOI

2011

• Comparison of protein structural motifs – challenges and algorithms. Improved approach and case studies

  SVOBODOVÁ VAŘEKOVÁ Radka SEHNAL David PRAVDA Lukáš OPPELT Jan IONESCU Crina-Maria GEIDL Stanislav KOČA Jaroslav

  Conference abstract

  Year: 2011, type: Conference abstract