Project information
Proteins in metabolism and interaction of organisms with the environment
- Project Identification
- MSM0021622413
- Project Period
- 1/2005 - 12/2011
- Investor / Pogramme / Project type
-
Ministry of Education, Youth and Sports of the CR
- Research Intents
- MU Faculty or unit
-
Faculty of Science
- prof. RNDr. Jaroslav Koča, DrSc.
- Other MU Faculty/Unit
-
Central European Institute of Technology
- Keywords
- proteins, structure function relationships, protein complexes, proteome, metabolome
The proposal is the follow up of the previous, in our view successful, long-term research plan "Structure-Function Relationships of Biomolecules and their Role in Metabolism" studied in 1998-2004, and partly the project "Laboratory of Structure and Dynamics of Biomolecules" in the framework of program "250" studied in 1996-2000. The results of these projects were published in tens of scientific articles communicated in renowned international journals with high impact factors. The key aim was identification and characterization of low molecular weight substances involved in metabolism of bacteria and fungi with the special attention devoted to biochemical activities and the structure.
This new proposal will deal with other proteins from various organisms, for example animal proteins binding pheromones or proteins interacting with sacharides. The function and regulation of enzymes will be studied by novel methods suitable for monitoring of in vivo activity via monitoring of intracellular metabolites. We will continue to use structural methods. Keywords of the long-term research plan are protein, its function, structure, structure-function relationships and complexes of proteins. More general keywords are proteome and metabolome. The project will focus on such hot topics of current life sciences like protein/DNA interactions, synthesis of proteins on ribosome or applications of photo-labile groups for directed geometrical changes of protein-substrate complexes and regulation of enzymatic reactions.
Publications
Total number of publications: 835
2006
-
Ergosterol is a signal molecule that leads to the expression of defence-related genes in tobacco
Year: 2006, type: Conference abstract
-
Ergosterol treatment leads to the expression of a specific set of defence-related genes in tobacco
Plant Molecular Biology, year: 2006, volume: 62, edition: 1-2
-
Evaluation of error in model-free parameters caused by asymmetric shielding tensor of base carbons in nucleic acids
XXII International Conference on MagneticResonance in Biological Systems-Abstracts, year: 2006
-
Experimental and quantum-chemical studies of N-15 NMR coordination shifts in palladium and platinum chloride complexes with pyridine, 2,2 '-bipyridine and 1,10-phenanthroline
Magnetic Resonance in Chemistry, year: 2006, volume: 2006, edition: 1, DOI
-
Haptický model interakce molekul
Year: 2006
-
Historický přehled vzniku molekulární psychiatrie
Česká a slovenská psychiatrie, year: 2006, volume: 102, edition: 5
-
Chain Mechanism in the Photocleavage of Phenacyl and Pyridacyl Esters in the Presence of Hydrogen Donors
Journal of Organic Chemistry, year: 2006, volume: 71, edition: 2
-
Challenges and advances in computational chemistry and physics. Computational studies of RNA and DNA
Year: 2006, number of pages: 635 s.
-
Changes of kinetic parameters in bacterial oxidation of elemental sulfur
Year: 2006, type: Conference abstract
-
Chemotaxonomic Characterisation of Pseudomonads by MALDI-TOF MS
Year: 2006, type: Conference abstract