doc. RNDr. Radka Svobodová, Ph.D.

2024

• Data Management of Biological Imaging Data

  SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš SVOBODOVÁ Radka

  Appeared in Conference without Proceedings

  Year: 2024, type: Appeared in Conference without Proceedings

• Fast, structure-based searching in a large-scale protein data repository

  SLANINÁKOVÁ Terézia GREŠOVÁ Katarína PROCHÁZKA David SPIŠAKOVÁ Viktória ROŠINEC Adrián ČILLÍK Jakub ŠPRINGEROVÁ Pavlína KŘENEK Aleš DOHNAL Vlastislav SVOBODOVÁ Radka ANTOL Matej

  Conference abstract

  Year: 2024, type: Conference abstract

• ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era

  ŠPAČKOVÁ Anna VÁVRA Ondřej RAČEK Tomáš BAZGIER Václav SEHNAL David DAMBORSKÝ Jiří SVOBODOVÁ Radka BEDNÁŘ David BERKA Karel

  Article in Periodical

  Nucleic Acids Research, year: 2024, volume: 52, edition: D1, DOI

• Rare ring conformations in PDB: Facts or wishful thinking?

  BUČEKOVÁ Gabriela DOSHCHENKO Viktoriia CHARESHNEU Aliaksei PORUBSKÁ Jana PAJTINKA Michal OLEKSIK Michal SVOBODA Tomáš HORSKÝ Vladimír SVOBODOVÁ Radka

  Article in Periodical (without peer review)

  Year: 2024, type: Article in Periodical (without peer review)

• RBP-Tar – a searchable database for experimental RBP binding sites

  GREŠOVÁ Katarína RAČEK Tomáš MARTINEK Vlastimil ČECHÁK David SVOBODOVÁ Radka ALEXIOU Panagiotis

  Article in Periodical

  F1000Research, year: 2024, volume: 12, edition: 755, DOI

• Scientific Dataset Management System for the Research Institute Based on Onedata

  SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš HANDL Josef KŘENEK Aleš SVOBODOVÁ Radka

  Conference abstract

  Year: 2024, type: Conference abstract

2023

• An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems.

  LAMOTHE Lucie JENSEN Jennifer R B IENASESCU Hans GUSTAFSSON Ove J R GAIGNARD Alban REPCHEVSKY Dmitry SVOBODOVÁ Radka RAČEK Tomáš ROŠINEC Adrián ANTOL Matej MÉNAGER Hervé

  Article in Periodical (without peer review)

  Year: 2023, type: Article in Periodical (without peer review)

• Conformational study of small carbon rings in ligands

  BUČEKOVÁ Gabriela DOSHCHENKO Viktoriia HORSKÝ Vladimír SVOBODOVÁ Radka

  Conference abstract

  Year: 2023, type: Conference abstract

• Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management

  ROŠINEC Adrián SVOBODA Tomáš RAČEK Tomáš KŘENEK Aleš SVOBODOVÁ Radka

  Appeared in Conference without Proceedings

  Year: 2023, type: Appeared in Conference without Proceedings

• Exploring the relationship between structural quality and journal impact factor

  PORUBSKÁ Jana HORSKÁ Veronika HORSKÝ Vladimír SVOBODOVÁ Radka

  Conference abstract

  Year: 2023, type: Conference abstract